dev(sweep): port the index-off timing arm to the Illumina script #385
cjfieldsconcordance.yml
on: push
Concordance vs R reference
3m 6s
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3 warnings
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Concordance vs R reference
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/upload-artifact@v4. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
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WFA gate is fixture-scale only
A green PacBio WFA gate means the experimental WFA+cap backend did not regress on this small fixture, NOT that WFA == NW. At scale capped WFA is NW parity-to-slower and unbounded WFA over-calls ~160 ASVs (issue #51). NW remains the default + error-model backend.
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WFA gate is fixture-scale only
A green Illumina WFA gate means the experimental WFA backend did not regress on this small fixture, NOT that WFA == NW. WFA ends-free is suboptimal (WFA2-lib #102) and over-calls low-abundance ASVs at scale (issue #51). NW remains the default + error-model backend.
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concordance-reports
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sha256:12034f30c614a16ce6179099548c527c5768df2f7564eca9515510da5f7cebb6
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