Skip to content

Synonym dbxrefs are not being displayed #29

Description

@cooperl09

In the plant structure development stage (PO:0009012) branch of the PO we have a large number of mappings from our stage terms to terms in other ontologies and vocabularies.
The corresponding mappings (eg GRO:ID) do not show up in the browser and you cannot search for them.

For example:
[Term]
id: PO:0007022
name: seed imbibition stage
namespace: plant_structure_development_stage
def: "A seed germination stage (PO:0007057) during which there is absorption of water by the seed (PO:0009010)." [Gramene:Anuradha_Pujar, ISBN:0306416875, POC:Laurel_cooper]
synonym: "0.1 imbibition in maize (related)" RELATED [MaizeGDB:64054]
synonym: "01 Beginning of seed imbibition in soybean (related)" RELATED [SOY:0000090]
synonym: "03 Seed imbibition complete in soybean (related)" RELATED [SOY:0000091]
synonym: "1.02-start of imbibition in barley (related)" RELATED [GRO:0007053]
synonym: "1.02-start of imbibition in oat (related)" RELATED [GRO:0007053]
synonym: "1.02-start of imbibition in Triticeae (related)" RELATED [GRO:0007053]
synonym: "1.02-start of imbibition in wheat (related)" RELATED [GRO:0007053]
synonym: "1.03-imbibition complete in barley (related)" RELATED [GRO:0007054]
synonym: "1.03-imbibition complete in oat (related)" RELATED [GRO:0007054]
synonym: "1.03-imbibition complete in Tricticeae (related)" RELATED [GRO:0007054]
synonym: "1.03-imbibition complete in wheat (related)" RELATED [GRO:0007054]
synonym: "BBCH growth stage 01 (related)" RELATED [ISBN:3826331524]
synonym: "imbibition in Arabidopsis (related)" RELATED [TAIR:0000394]
synonym: "imbibition in Solanaceae (related)" RELATED [SGN:0000004]
xref: PO_GIT:366
xref: PO_GIT:595
is_a: PO:0007057 ! seed germination stage

Is there a way to display these in the Planteome browser?

Activity

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Metadata

Metadata

Assignees

No one assigned

    Type

    No type

    Projects

    No projects

      Milestone

      No milestone

      Relationships

      None yet

      Development

      No branches or pull requests

      Issue actions