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@NESCent National Evolutionary Synthesis Center

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    49 repositories

    • website

      Public
      NESCent static website (post-wind down)
      HTML
      •0•0•0•0•Updated Oct 20, 2025Oct 20, 2025

    • MINOTAUR

      Public
      Multivariate vIsualisatioN and OuTlier Analysis Using R
      R
      •4•14•10•1•Updated Apr 8, 2023Apr 8, 2023

    • community-and-code

      Public
      Supplementary data for "Community and Code: Nine Lessons from Nine NESCent Hackathons"
      CSS
      •0•2•3•0•Updated Sep 9, 2022Sep 9, 2022

    • plhdb

      Public
      Primate Life Histories Database Codebase
      JavaScript
      •
      GNU General Public License v3.0
      •0•5•8•0•Updated Mar 2, 2021Mar 2, 2021

    • popgenInfo

      Public
      Vignettes for Population Genetics in R
      CSS
      •
      MIT License
      •51•26•44•4•Updated Aug 11, 2020Aug 11, 2020

    • dplace

      Public
      D-PLACE: Database of Phylogenies of Languages for the study of Cultural Evolution
      JavaScript
      •
      MIT License
      •10•6•0•3•Updated Jun 5, 2020Jun 5, 2020

    • popgen-docker

      Public
      Dockerfile(s) for population genetics
      dockerrpopulation-genetics
      dockerrpopulation-genetics
      Dockerfile
      •
      MIT License
      •2•6•4•0•Updated May 10, 2019May 10, 2019

    • TraitDB

      Public
      Trait Database using Rails 4
      Ruby
      •
      MIT License
      •2•4•29•0•Updated Apr 30, 2019Apr 30, 2019

    • FossilCalibrations

      Public
      Fossil calibrations database
      PHP
      •
      BSD 2-Clause "Simplified" License
      •4•16•18•0•Updated Sep 18, 2018Sep 18, 2018

    • RMesquite

      Public
      An package for interoperability between Mesquite (http://mesquiteproject.org) and R
      Java
      •
      GNU General Public License v2.0
      •0•0•1•0•Updated Jun 8, 2018Jun 8, 2018

    • feedexp.org

      Public
      Static tombstone page with data archive links and information about the Feeding Experiments End-user Database (FEED)
      JavaScript
      •0•0•0•0•Updated May 7, 2018May 7, 2018

    • feedingdb

      Public
      Feeding Experiments End-user Database (FEED)
      Web Ontology Language
      •
      GNU General Public License v3.0
      •1•3•3•0•Updated May 1, 2018May 1, 2018

    • hip_hack_howto

      Public
      Hackathon guidance from NESCent's Hackathons, Interoperability, Phylogenies working group.
      TeX
      •1•1•9•0•Updated Apr 14, 2017Apr 14, 2017

    • 1000-datasets

      Public
      Tracking reuse of 1,000 publicly available scientific datasets across 10 repositories. Work in progress!
      TeX
      •3•5•7•1•Updated Nov 17, 2016Nov 17, 2016

    • phylr

      Public
      An initial implementation of the search functionality described in the PhyloWS standard for accessing phylogenetic information. A 2009 Google Summer of Code pro…
      Java
      •
      Apache License 2.0
      •0•0•0•0•Updated Mar 9, 2016Mar 9, 2016

    • nescent.github.io

      Public
      Public site for NESCent digital asset archival
      CSS
      •
      Other
      •0•0•1•0•Updated Jan 11, 2016Jan 11, 2016

    • ontologies-in-evobio-course-2012

      Public
      Ontologies for Evolutionary Biology course held in 2012
      Web Ontology Language
      •0•0•0•0•Updated Aug 19, 2015Aug 19, 2015

    • ontologies-in-evobio-course-2013

      Public
      Ontologies for Evolutionary Biology course held in 2013
      Web Ontology Language
      •0•0•0•0•Updated Aug 19, 2015Aug 19, 2015

    • feed-ontology-closure

      Public
      Tool for asserting transitive closure axioms, used by the FEED project.
      Scala
      •
      MIT License
      •0•0•0•0•Updated Aug 18, 2015Aug 18, 2015

    • r-popgen-hackathon

      Public
      Population Genetics Hackathon, to be held at NESCent on March 16-20, 2015
      2•18•18•0•Updated Jul 13, 2015Jul 13, 2015

    • Tools-for-Evo-Hack

      Public
      GMOD Tools for Evolutionary Biology Hackathon
      0•1•0•0•Updated Jul 7, 2015Jul 7, 2015

    • ParkNotebooks

      Public
      Scripts for digitization and curation of the Park Notebooks
      Python
      •
      GNU General Public License v3.0
      •0•2•2•0•Updated Jul 7, 2015Jul 7, 2015

    • fcdb-api

      Public
      JSON/REST API for FossilCalibrations
      JavaScript
      •
      MIT License
      •1•0•5•0•Updated Jul 1, 2015Jul 1, 2015

    • max-bodysize-evol

      Public
      The codebase for the Maximum Bodysize Evolution Database developed by the Working Group "Phanerozoic body size trends in time and space: macroevolution and macr…
      Ruby
      •
      MIT License
      •1•0•1•0•Updated Jun 26, 2015Jun 26, 2015

    • heliconius-db

      Public
      Database schema and web-application for natural diversity of phenotypes and genotypes collected for the neotropical Heliconius butterflies
      Java
      •0•0•0•0•Updated Jun 26, 2015Jun 26, 2015

    • phylosoc2007jestill

      Public
      Command Line Interface to a Topological Query Application for BioSQL - A 2007 Google Summer of Code project
      Perl
      •0•0•0•0•Updated Mar 29, 2015Mar 29, 2015

    • dbhack1

      Public
      Automatically exported from code.google.com/p/dbhack1
      Java
      •0•0•0•0•Updated Mar 15, 2015Mar 15, 2015

    • diversification

      Public
      Design and implementation of methods to estimate speciation and extinction rates that may depend on a character state.
      Python
      •0•0•0•0•Updated Feb 9, 2015Feb 9, 2015

    • evogen

      Public
      Phylogenetic tree rendering as a web-service. Demonstration project for the EvoGenomics WG at NESCent.
      Java
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jan 26, 2015Jan 26, 2015

    • pmdb

      Public
      Code for the Plant Mating Systems Evolution Database
      Java
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jan 25, 2015Jan 25, 2015
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