Repositories list

• amigo

  Public
  This repo is the Planteome fork of geneontology.org AmiGO2 project. Issues in this repo should be reported only on AmiGO issues. Issues can be pushed upstream…

  JavaScript

  •

  BSD 3-Clause "New" or "Revised" License

  •1717 forks•44 stars•1212 issues•00 pull requests•Updated May 13, 2026May 13, 2026

• plant-ontology

  Public
  Repository for the Plant Ontology

  owlplantsplant-development+ 4

  owlplantsplant-developmentobofoundryplant-ontologyobo-formatplant-anatomy

  Perl

  •

  Creative Commons Attribution 4.0 International

  •1919 forks•7373 stars•106106 issues•22 pull requests•Updated Apr 24, 2026Apr 24, 2026

• trait-mappings

  Public
  This repo contains the mapping files betweeen the Trait Ontology and the Crop Ontology files

  00 forks•11 star•00 issues•00 pull requests•Updated Apr 23, 2026Apr 23, 2026

• plant-trait-ontology

  Public
  Explore the Plant Trait Ontology on the Planteome site.

  owlobophenotype+ 3

  owlobophenotypeobofoundryplant-trait-ontologyplant-traits

  Python

  •

  Creative Commons Attribution 4.0 International

  •1212 forks•4848 stars•250250 issues•00 pull requests•Updated Apr 22, 2026Apr 22, 2026

• go-site-xrefs-fork

  Public
  Use this to add xrefs to metadata/db-xrefs.yaml and submit a pull request. Then they will be in the global xref file that AmiGO2 uses. Before making any chang…

  JavaScript

  •

  BSD 3-Clause "New" or "Revised" License

  •8989 forks•00 stars•11 issue•00 pull requests•Updated Apr 17, 2026Apr 17, 2026

• plant-stress-ontology

  Public
  An ontology containing biotic and abiotic plant stresses. Part of the Planteome suite of reference ontologies. Formerly called the Ontology of Plant Stress

  ontologyobobiotic-stresses+ 3

  ontologyobobiotic-stressesobofoundryplant-stressabiotic-stresses

  Makefile

  •88 forks•1818 stars•22 issues•00 pull requests•Updated Apr 14, 2026Apr 14, 2026

• planteome-annotation-data

  Public
  This is a place to discuss issues around the Planteome annotation data and store useful scripts etc.

  Perl

  •00 forks•11 star•2222 issues•00 pull requests•Updated Mar 21, 2026Mar 21, 2026

• plant-experimental-conditions-ontology

  Public
  Repository for the Plant Experimental Conditions Ontology

  owloboexposures+ 2

  owloboexposuresobofoundryplant-treatments

  Python

  •

  Creative Commons Attribution 4.0 International

  •55 forks•1212 stars•77 issues•00 pull requests•Updated Mar 5, 2026Mar 5, 2026

• planteome-core

  Public
  Repository (and tracker) for a planteome.owl importer for the whole project

  Makefile

  •00 forks•11 star•11 issue•00 pull requests•Updated Jan 14, 2026Jan 14, 2026

• CO_369-sainfoin-traits

  Public
  Sainfoin Trait Ontology

  ontologytraitssainfoin

  ontologytraitssainfoin

  00 forks•11 star•11 issue•00 pull requests•Updated May 29, 2025May 29, 2025

• CO_334-cassava-traits

  Public
  Cassava Trait Ontology maintained by Crop Ontology and Cassavabase

  csvobointegrated

  csvobointegrated

  11 fork•11 star•4747 issues•11 pull request•Updated May 15, 2025May 15, 2025

• RTB-Ontology-Release-Tools

  Public
  Tools and guidelines for creating releases for RTB ontologies.

  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 16, 2025Apr 16, 2025

• CO_325-banana-traits

  Public
  Banana Trait Ontology maintained by Crop Ontology and Musabase

  bananaontologyobo+ 1

  bananaontologyobotraits

  Java

  •00 forks•00 stars•44 issues•00 pull requests•Updated Apr 7, 2025Apr 7, 2025

• CO_343-yam-traits

  Public
  Yam trait ontology

  csvobointegrated

  csvobointegrated

  11 fork•11 star•66 issues•00 pull requests•Updated Mar 27, 2025Mar 27, 2025

• CO_331-sweetpotato-traits

  Public
  Sweetpotato Trait Ontology maintained by Crop Ontology and SweetpotatoBase

  csvobointegrated

  csvobointegrated

  44 forks•22 stars•3030 issues•44 pull requests•Updated Mar 24, 2025Mar 24, 2025

• CO_350-oat-traits

  Public
  Oat trait dictionary developed by Crop Ontology, Oat Global, T3 and PepsiCO

  csvontologytraits+ 1

  csvontologytraitsoats

  11 fork•00 stars•1515 issues•00 pull requests•Updated Jan 30, 2025Jan 30, 2025

• django_curate

  Public
  Python

  •00 forks•00 stars•1515 issues•00 pull requests•Updated Jan 29, 2025Jan 29, 2025

• CO_324-sorghum-traits

  Public
  Sorghum trait ontology

  csvobointegrated+ 1

  csvobointegratedsssom

  00 forks•11 star•11 issue•00 pull requests•Updated Jan 22, 2025Jan 22, 2025

• CO_341-pigeonpea-traits

  Public
  Pigeon pea ontology

  csvobointegrated

  csvobointegrated

  00 forks•00 stars•11 issue•00 pull requests•Updated Jan 22, 2025Jan 22, 2025

• CO_336-soybean-traits

  Public
  Crop Ontology soybean traits

  csvobointegrated

  csvobointegrated

  00 forks•00 stars•00 issues•00 pull requests•Updated Jan 22, 2025Jan 22, 2025

• CO_322-maize-traits

  Public
  Maize trait ontology

  csvobointegrated

  csvobointegrated

  22 forks•33 stars•22 issues•00 pull requests•Updated Jan 22, 2025Jan 22, 2025

• CO_330-potato-traits

  Public
  Potato trait ontology

  csvobointegrated+ 1

  csvobointegratedsssom

  00 forks•22 stars•2020 issues•00 pull requests•Updated Jan 22, 2025Jan 22, 2025

• CO_321-wheat-traits

  Public
  Wheat trait ontology

  csvobointegrated

  csvobointegrated

  22 forks•66 stars•1111 issues•22 pull requests•Updated Jan 20, 2025Jan 20, 2025

• CO_339-lentil-traits

  Public
  Lentil trait ontology

  csvobointegrated

  csvobointegrated

  00 forks•00 stars•00 issues•00 pull requests•Updated Jan 20, 2025Jan 20, 2025

• CO_320-rice-traits

  Public
  Rice trait ontology

  csvobointegrated+ 1

  csvobointegratedsssom

  00 forks•22 stars•77 issues•22 pull requests•Updated Jan 15, 2025Jan 15, 2025

• CO_372-strawberry-traits

  Public
  Strawberry trait Ontology

  ontologyphenotypetraits+ 1

  ontologyphenotypetraitsstrawberry

  00 forks•00 stars•00 issues•00 pull requests•Updated Sep 19, 2024Sep 19, 2024

• CO_367-quinoa-traits

  Public
  Quinoa Trait Ontology

  00 forks•00 stars•00 issues•00 pull requests•Updated Jul 4, 2024Jul 4, 2024

• CO_326-coconut-traits

  Public
  Coconut Trait Ontology

  ontologytraitscoconut

  ontologytraitscoconut

  00 forks•00 stars•00 issues•00 pull requests•Updated Jun 11, 2024Jun 11, 2024

• CO_346-mungbean-traits

  Public
  Mungbean trait ontology

  csvontologytraits+ 1

  csvontologytraitsmungbean

  00 forks•00 stars•00 issues•00 pull requests•Updated Jun 10, 2024Jun 10, 2024

• CO_360-sugar-kelp-traits

  Public
  Sugar Kelp trait ontology

  csvontologysugar+ 2

  csvontologysugartraitskelp

  00 forks•00 stars•00 issues•00 pull requests•Updated Jun 5, 2024Jun 5, 2024