A Python toolbox for quantitative, reproducible flow cytometry analysis
(Legacy project) A modular laboratory experiment management suite, predecessor to qudi-core.
Everything within the Land model (Soil Plant Atmosphere Module, Land Hydrology, etc)
Nellie: Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy
ImSwitch is a software solution in Python that aims at generalizing microscope control by providing a solution for flexible control of multiple microscope modalities.
An open-source Raspberry-Pi based photobioreactor for cultivating and assessing physiology (photosynthesis & productivity) in microscopic algae.
Self-supervised models for encoding protein localization patterns from microscopy images
Precision current source, with optional optical feedback, for driving LEDs and laser diodes
An open-source Arduino based chlorophyll fluorometer for quantifying photosynthesis in photosynthetic organisms.
Resolution Enhancement Algorithm using Deblurring by Pixel Reassignment. This repository implements cutting-edge techniques for improving image resolution and clarity by reassigning pixels to correct for blur. Ideal for microscopy, photography, image processing, and computational optics researchers.
An interactive image processing program for biologists written in Python.
File format agnostic low level, high performance API to read and process time-tagged-time resolved (TTTR) data for single-molecule and image spectroscopy)
GLabViz - Interactive Analysis and Visualization Application for Scientific Data written in Python using Qt and pyqtrgaph
Utilities for pre-processing emission-excitation-matrix (EEM).
Modeling and Bayesian analysis of fluorescence and absorbance assays.
[MICCAI 2023] This is the official code for the paper "A Feature-Driven Richardson-Lucy Deconvolution Network"
An open-source python library for the processing of fluorescence video data
Random Laser simulation using COMSOL Multiphysics.
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