gwas-catalog

gwasrapidd: an R package to query, download and wrangle GWAS Catalog data

pandasGWAS: a Python package for easy retrieval of GWAS Catalog data

A curated list (with links) of useful tools for genome-wide association analysis.

Make interactive LocusZoom plots from a local GWAS file

Computational Strategies in Nutrigenetics: Constructing a Reference Dataset of Nutrition-Associated Genetic Polymorphisms https://doi.org/10.1101/2023.08.04.23293659

Analysis of regulatory impacts of autism-associated SNPs on biological pathways in the fetal and adult cortex.

R package to access GWAS Catalog FTP data

Cancer variant data from genome-wide association studies (GWAS)

An Alfred workflow to browse the GWAS catalog

Analysis of genotype data from 23andMe DNA testing.

Snakemake workflow designed to annotate VCF files withe SnpEff / SniSift

Simple wrapper for the GWAS Catalog

Extracting disease-gene associations from the GWAS Catalog

EDA of different databases to extract IBD-relevant genes, their coverage in a 10X Genomics spatial transcriptomics panel and the main cell types and tissues related to these genes.

Easily install and load the hapiverse

De novo discovery of traits co-occurring with chronic obstructive pulmonary disease.

Pipeline bioinformático automatizado para el mapeo, análisis de variantes (GWAS Catalog) y estudio de vías metabólicas (Reactome) compartidas entre TDAH y Altas Capacidades Intelectuales.

🧬 A suite of Python CLI utilities for bioinformatics: automated PGS to PLINK conversion, genome build liftovers (hg19/hg38), and ISOGG ↔ Y-DNA haplogroup converter

GWAS Catalog (EBI/NHGRI) MCP — curated catalog of genome-wide association studies.